How to figure rafter length for a whole roof: every common rafter on the same slope and span is the same length, so a rafter length calculator only has to work one out. Half the span runs from the outside of one wall to the theoretical centre of the ridge. Take off half the ridge thickness so the rafter stops at the face of the ridge board. From that run the rise follows the pitch, and the line length is the slope distance.
To calculate the length of rafters for a roof with eaves, remember the overhang is a horizontal projection: it gets added to the run, and the whole run is multiplied by the pitch factor. The tail keeps falling on the same slope, so its rise grows with it. It is not the building rise pasted onto a longer run. A hip rafter calculator applies √(2 + (pitch ÷ 12)²) to the run, because a hip or valley on a regular 45° plan corner is longer again.
A shed or lean-to roof has one slope and no ridge. The shed roof rafter calculator treats the run as the full span: the rafter goes from the high wall to the low wall, there is no hip, and the high wall has to stand taller than the low wall by the rise.
For the birdsmouth, open More options and enter the seat cut and the rafter depth. The calculator gives the height above the plate and checks the notch against the quarter-depth limit, so you find out the notch is too deep before you cut it into a rafter.
The pitch cut is the angle of the plumb cut, which is the roof pitch itself. On a speed square, set the pivot on the rafter edge and the pitch number (6 for a 6:12 roof) on the same edge, then scribe along the blade. For the seat cut, mark the plumb line where the rafter crosses the outside of the wall. The seat starts that many inches up from the bottom edge: seat width times pitch ÷ 12. Height above plate is the plumb distance left from there to the top edge.
If you only have a rise and a run, find the pitch first with the roof pitch calculator. Once the rafters are sized, the roofing calculator turns the same span and pitch into roof square feet and shingles, and the feet and inches calculator adds up rafter and overhang lengths.